BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D02LP1|AL426016
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig568 1570 0.0
>3x_Contig568
Length = 1982
Score = 1570 bits (788), Expect = 0.0
Identities = 809/820 (98%)
Strand = Plus / Minus
Query: 1 ccattcttctctgggtagctccagcattcctctatcaaaaatctgttgcaatgttaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ccattcttctctgggtagctccagcattcctctatcaaaaatctgttgcaatgttaatga 865
Query: 61 tttgagctcatccttggagagtttgaagttatgcattttatgagagtgagtataattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tttgagctcatccttggagagtttgaagttatgcattttatgagagtgagtataattctg 805
Query: 121 tttgcaaggcgatttgacagtatccytatttgtacgtttgtttgatttggtgaaatattt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 804 tttgcaaggcgatttgacagtatccttatttgtacgtttgtttgatttggtgaaatattt 745
Query: 181 atattcaatgcytcctagtttcgagggatactgctttttgtcaaaaaacaaatccaccaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atattcaatgcttcctagtttcgagggatactgctttttgtcaaaaaacaaatccaccaa 685
Query: 241 agcaaagtgctccattttatcatcggtagtggaagaaggtaggcatagcgcyagtccyaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 684 agcaaagtgctccattttatcatcggtagtggaagaaggtaggcatagcgctagttctaa 625
Query: 301 acttttatctttcatttcatcagtacccataatgcttttgttatcgaaaatattacgtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acttttatctttcatttcatcagtacccataatgcttttgttatcgaaaatattacgtga 565
Query: 361 gacgacattcctttcaccaattgttgccatgactcyagcagcaccgagcttaattctgaa 420
||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 564 gacgacatttctttcaccaattgttgctatgactctagcagcaccgagcttaattctgaa 505
Query: 421 attaggacagtctaatagagagttcatgacctccaaggaattgtatatcccacgattcat 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attaggacagtttaatagagagttcatgacctccaaggaattgtatatcccacgattcat 445
Query: 481 agtattattgagtaaacgagtagtgaaagccaaatactcccatacytcgtcttcgtctgt 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 444 agtattattgagtaaacgagtagtgaaagccaaatactcccatacttcgtcttcgtctgt 385
Query: 541 cgtgttcattagttccaatttacatccatttttcttccagtctgtagtatcataggagta 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgttcattagttccaatttacatccatttttcttccagtctgtagtatcataggagta 325
Query: 601 tttcttcagtacatttgataagatttcatcgattctatccagaacaggaatccaaatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttcttcagtacatttgataagatttcatcgattctatccagaacaggaatccaaatgta 265
Query: 661 caaatcatctctcgaacgatcccattctttaatatcttttaacttcttgatgaaatcagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caaatcatctctcgaacgatcccattctttaatatcttttaacttcttgatgaaatcagt 205
Query: 721 accatcacagttaattaagtcattgatcaacggcttgaacgatttcgcattttcctcttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 accatcacagttaattaagtcattgatcaacggcttgaacgatttcgcattttcctcttt 145
Query: 781 ccgtagcttttcagctttcgttaagacggccatcttttgt 820
||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ccgtagcttttcagctttcgttaagacggccatcttttgt 105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6839
Number of Sequences: 1807
Number of extensions: 6839
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)